Penn Quantitative Imaging Resource for Pancreatic Cancer


Code & Tools

VarianSliceConvert

Description: This is a command line tool that allows for the conversion of Varian files (typically named with the .fdf extension) to be converted to more commonly used image formats such nifti

Resource Type: Software
Site: Github.com
Link: VarianSliceConvert
Research Area: Image processing & analysis

dicom_tree

Description: Provides methods for pulling out the meta data from dicom studies as well as methods for converting between dicom and nifti format.

Resource Type: Software
Site: Github.com
Link: Github
Research Area: Image processing & analysis

Python Code for Radial k-space DW-MRI Reconstruction and Processing for ADC Maps

Description: DWI_shell can be used for reconstructing radially acquired DWIs, obtaining apparent diffusion coefficient (ADC) and kurtosis index (KI) maps from a set of DWIs, and for obtaining metrics for regions of interest (ROIs).

Resource Type: Software
Site: Github.com
Link: Github
Research Area: Image processing & analysis, Diffusion MR